PROTAC FAK degrader 1

Degrader (PROTAC) of PTK2

Structure

Information

  • PTK2
  • Degrader (PROTAC)

In Vitro Validations

Uniprot ID: Q05397
Target Class: Kinase
Target SubClass: Tyr kinase
Potency: IC50
Potency Value: 6.5 ± 0.5 nM
Potency Assay: FAK inhibition assay
PDB ID for probe-target interaction (3D structure): --
Target aliases:
Focal adhesion kinase 1, FAK1, FAK, PTK2, FAK1_HUM ...

DOI Reference: 10.1021/jacs.8b08008

In Cell Validations

In Vivo Data

No in Vivo Validations

Off-Target Selectivity Assesments

Potency assay (off target): DiscoverX KINOMEscan was performed for PROTAC-3 at 1 μM. Out of a panel of 403 different kinases PROTAC-3 binds to only 20 kinases with less than 35% of control remaining measured by competitive binding.
Probe Selectivity in Vitro:
FAK is the only kinase bound by PROTAC-3 with less than 1% of control remaining.
Potency assay, off target (cells): Reverse Phase Protein array (RPPA) analysis was performed to assess proteins levels after treatment with PROTAC-3.
Probe Selectivity in Cell:
RPPA data from MDA-MB-231 cell lysates indicate a reduced level for AR, p-Akt(S473) and p-Src(Y527).
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SERP ratings and comments


SERP Ratings

In Cell Rating

(last updated: 24 Jan 2025 )

SERP Ratings

In Cell Rating

SERP Comments:

It is also worth considering the use of GSK215, as this FAK-targeted PROTAC has been found to exhibit potent FAK degradation activity even in mice following a subcutaneous injection. See: Law RP, Nunes J, Chung CW, et al. Discovery and Characterisation of Highly Cooperative FAK-Degrading PROTACs. Angew Chem Int Ed Engl. 2021;60(43):23327-23334. doi:10.1002/anie.202109237.

(last updated: 2 Feb 2025 )

SERP Ratings

In Cell Rating

SERP Comments:

First FAK degrader with very good in-vitro potency and rate of degradation with a Dmax >99%. The compound potently inhibited FAK downstream signaling, such as Axilin and Akt phosphorylation, and was effective in wound healing and Transwell cell-invasion assays using MDA-MB-231 cells. However, proteasome-dependent inhibition in the presence of a proteasome inhibitor was not tested. As PROTAC-3 is derived from the multikinase inhibitor Defactinib, the selectivity of the compound might be a limiting factor. Although showing a slightly better selectivity profile than the lead, the off-target activity was not completely analysed in a cellular context. A corresponding negative control, PROTAC-7, is available and shows equally potent inhibition of FAK but does not degrade the protein (IC50 = 11 nM, Dmax = 0%). In summary, I would still recommend the compound, as there are currently no better alternatives available. Better profiling in terms of selectivity would be desirable and results should therefore be interpreted with caution.

(last updated: 13 Feb 2025 )