MSC778

MSC778 : Inhibitor of FEN1

Structure

Information

  • FEN1
  • Inhibitor
  • up to 1 uM

In Vitro Validations

Uniprot ID: P39748
Target Class: Enzyme
Target SubClass: Endonuclease
Potency: IC50
Potency Value: 3.0 nM
Potency Assay: Fluorescently labeled 5′-flap cleavage assay
PDB ID for probe-target interaction (3D structure): --
Target aliases:
Flap endonuclease 1, RAD2, FEN1, FEN1_HUMAN, hFEN- ...

DOI Reference: 10.1021/acs.jmedchem.5c01526

Uniprot ID: P39748
Target Class: Enzyme
Target SubClass: Endonuclease
Potency: Kd
Potency Value: 2.9 nM
Potency Assay: SPR
PDB ID for probe-target interaction (3D structure): --
Target aliases:
Flap endonuclease 1, RAD2, FEN1, FEN1_HUMAN, hFEN- ...

DOI Reference: 10.1021/acs.jmedchem.5c01526

In Cell Validations

In Vivo Data

Off-Target Selectivity Assesments

Probe Selectivity in Vitro:
Selectivity against other nucleases: EXO1 145-fold GEN1 516-fold XPG 65-folda
Probe Selectivity in Vitro:
MSC778 displayed excellent selectivity against all members of an in-house panel of the broader nuclease superfamily, with MRE11 being the next closest in activity (>1000-fold selectivity).
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SERP ratings and comments


SERP Ratings

In Cell Rating
In Model Organisms

SERP Comments:

MSC778 is a potent FEN1 nuclease inhibitor, as validated by a range of biochemical and biophysical assays (endonuclease activity and SPR). Extensive SAR supports this conclusion, as well as the availability of a chiral, less potent negative control compound. MSC778 also shows good selectivity towards many other nucleases (> 145 fold vs EXO1, > 516 fold vs GEN1, and > 65 fold vs XPG). In addition, MSC778 has been demonstrated through a range of assays to have good cellular target engagement and on-target activity, at concentrations < 1 uM (e.g. NanoBRET and CETSA for target engagement, and inhibition of BRCA2 KO cell viability). This probe is recommended for use in cells, however it remains to be seen what the appropriate concentration is for animal studies. The efficacy data 100 mg/kg of MSC778 delivered orally in combination with Niraparib to mice with xenografts looks promising, however, as well as solid pharmacokinetic properties (T1/2 > 3 h, solubility > 400 uM, F(P/O) > 15%).

(last updated: 18 Dec 2025 )