INY-06-061

INY-06-061 : Degrader (PROTAC) of MAPK7

Structure

Information

  • MAPK7
  • Degrader (PROTAC)
  • 100 nM up to 1 uM, hook effect at 5 uM
  • Reviewer recommended concentration: 500 nM to 1 µM

In Vitro Validations

Uniprot ID: Q13164
Target Class: Kinase
Target SubClass: CMGC
Potency: Kd
Potency Value: 12 nM
Potency Assay: Biochemical binding to recombinant ERK5 measured via KdELECT assay (Eurofins)
PDB ID for probe-target interaction (3D structure): --
Target aliases:
Mitogen-activated protein kinase 7, PRKM7, ERK5, B ...

DOI Reference: 10.1016/j.chembiol.2022.09.004

In Cell Validations

In Vivo Data

No in Vivo Validations

Off-Target Selectivity Assesments

Potency assay, off target (cells): INY-06-061 did not destabilize BRD4 or AURKA in MOLT4 cells. MS-based global proteomics profiling analysis of ∼7,700 proteins and ERK5 (MAPK7) was the only protein whose abundance was significantly downregulated in MOLT4 cells treated with 100 nM INY-06-061 for 5 h, indicating that INY-06-061 is a potent and highly selective ERK5 degrader.
Potency assay (off target): Biochemical selectivity across 468 kinases was measured through the scanMAX kinase assay panel (Eurofins), showed only ERK5 was affected at 1 uM
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SERP ratings and comments


SERP Ratings

In Cell Rating

SERP Comments:

INY-06-061 demonstrates potent and rapid degradation of ERK5 (MAPK7) in cells at sub-micromolar concentrations, but not at supra-micromolar concentrations due to hook effect. Selectivity for ERK5 was shown through cell-free kinome screening and global proteomics profiling analysis in cells. INY-06-089 can serve as an inactive negative control for INY-06-061. Mechanism of action through the ubiquitin-proteasome system was verified using proteasomal and neddylation inhibitors, and indirect evidence of target engagement through cellular competitive binding assays using an ERK5 ligand. Anti-proliferative activity was tested in a panel of 750 cell lines, ERK5-dependent cancer cell lines, and human endothelial cells with little or no effect on proliferation and inflammatory response, indicating a phenotypic discrepancy between genetic knockdown and INY-06-061-induced degradation of ERK5.

(last updated: 29 Feb 2024 )

SERP Ratings

In Cell Rating

SERP Comments:

INY-06-061 is a potent ERK5 degrader that is well profiled, showing high binding affinity to the target and also dependency on ubiquitin-proteasome system. Complete data on Dmax is not yet established, as well as the time course of the degradation. However, the experiments conducted prove the specific degradation of ERK5 - though it does not stop cell proliferation in cancer models.

(last updated: 20 Feb 2025 )